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๐Ÿ” program development ๐Ÿ“‚ Chemistry
Showing 1184 results for "program development" in Chemistry
Chemistry Preprint PDF DOI

PyTIE: A Python Program for the Evaluation of Degree-Based Topological Descriptors and Molecular Entropy

Sahaya Vijay Jeyaraj, Roy S, Govardhan S, Tony Augustine, Jyothish K ยท 2025

We have developed PyTIE (Python Topological Indices Expressions) which is defined as the collections of Python packages such as PyTIE D, PyTIE DS, PyTIE SMS DE, and PyTIE SMS DSE, which are open-sourcโ€ฆ

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Chemistry Preprint PDF DOI

QC Lab: A Python Package for Quantum-Classical Dynamics

Alex Krotz, Ethan Byrd, Ken Miyazaki, Roel Tempelaar ยท 2025

QC Lab is an open-source Python package for QC dynamics simulations aimed to promote the development of QC algorithms, and their application to a wide variety of relevant model problems. It follows a โ€ฆ

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Chemistry Preprint PDF DOI

Foundation Models for Discovery and Exploration in Chemical Space

Alexius Wadell, Anoushka Bhutani, Victor Azumah, Austin R. Ellis-Mohr, Celia Kelly, Hancheng Zhao, Anuj K. Nayak, Kareem Hegazy, Alexander Brace, Hongyi Lin, Murali Emani, Venkatram Vishwanath, Kevin Gering, Melisa Alkan, Tom Gibbs, Jack Wells, Lav R. Varshney, Bharath Ramsundar, Karthik Duraisamy, Michael W. Mahoney, Arvind Ramanathan, Venkatasubramanian Viswanathan ยท 2025

Accurate prediction of atomistic, thermodynamic, and kinetic properties from molecular structures underpins materials innovation. Existing computational and experimental approaches lack the scalabilitโ€ฆ

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Chemistry Preprint PDF DOI

Harnessing dressed time-dependent density functional theory for the non-perturbative regime: Electron dynamics with double excitations

Dhyey Ray, Anna Baranova, Davood B. Dar, Neepa T. Maitra ยท 2025

Recent progress has been made in capturing spectral features of electronic states of double-excitation character in time-dependent density functional theory (TDDFT) through a frequency-dependent kerneโ€ฆ

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Chemistry Preprint PDF DOI

Quantized Skeletal Learning (QSL): A Differentiable Programming Approach for Skeletal Reduction of Chemical Mechanisms

Opeoluwa Owoyele ยท 2025

This paper presents a data-driven approach, referred to as Quantized Skeletal Learning (QSL), for generating skeletal mechanisms. The approach has two key components: (1) a weight vector that can be uโ€ฆ

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Chemistry Preprint PDF DOI

QCell: Comprehensive Quantum-Mechanical Dataset Spanning Diverse Biomolecular Fragments

Adil Kabylda, Sergio Suarez-Dou, Nils Davoine, Florian N. Brunig, Alexandre Tkatchenko ยท 2025

Recent advances in machine learning force fields (MLFFs) are revolutionizing molecular simulations by bridging the gap between quantum-mechanical (QM) accuracy and the computational efficiency of mechโ€ฆ

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Chemistry Preprint PDF DOI

Detailed Kinetic Model for Combustion of NH3/H2 Blends

Yu-Chi Kao, Anna C. Doner, Timo T. Pekkanen, Chuangchuang Cao, Sunkyu Shin, Alon Grinberg Dana, Yi-Pei Li, William H. Green ยท 2025

Ammonia is a promising zero-carbon fuel for industrial and transport applications, but its combustion is hindered by flame instabilities, incomplete oxidation, and the formation of nitrogen oxides. Acโ€ฆ

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Chemistry Preprint PDF DOI

Analysis of divergent dynamics of exactly factorized electron-nuclear wavefunctions

Julian Stetzler, Sophya Garashchuk, Vitaly A. Rassolov (Department of Chemistry & Biochemistry, University of South Carolina, Columbia, USA) ยท 2025

The Exact Factorization (XF) of molecular wavefunctions can be viewed as an 'electronic wavepacket' framework for quantum dynamics. It is an appealing alternative to the conventional non-adiabatic dynโ€ฆ

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Chemistry Preprint PDF DOI

A unified framework for semiclassical reaction rate theory

Joseph E. Lawrence ยท 2025

A general semiclassical theory for the calculation of reaction rate constants is developed. The theory can be understood as a formal framework that encompasses existing semiclassical methods: instantoโ€ฆ

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Chemistry Preprint PDF DOI

Mixed-precision ab initio tensor network state methods adapted for NVIDIA Blackwell technology via emulated FP64 arithmetic

Cole Brower, Samuel Rodriguez Bernabeu, Jeff Hammond, John Gunnels, Sotiris S. Xanthea, Martin Ganahl, Andor Menczer, Ors Legeza ยท 2025

We report cutting-edge performance results via mixed-precision spin adapted ab initio Density Matrix Renormalization Group (DMRG) electronic structure calculations utilizing the Ozaki scheme for emulaโ€ฆ

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Chemistry Preprint PDF DOI

The PPP model - a minimal viable parametrisation of conjugated chemistry for modern computing applications

Marcel David Fabian, Nina Glaser, Gemma C. Solomon ยท 2025

The semi-empirical Pariser-Parr-Pople (PPP) Hamiltonian is reviewed for its ability to provide a minimal model of the chemistry of conjugated $\pi$-electron systems, and its current applications and lโ€ฆ

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Chemistry Preprint PDF DOI

A Multimode Classical Hierarchical Fokker-Planck Equations Approach to Molecular Vibrations: Simulating Two-Dimensional Spectra

Ryotaro Hoshino, Yoshitaka Tanimura ยท 2025

The multimode Brownian model with nonlinear system-bath coupling offers a flexible framework for studying both intra- and intermolecular vibrational modes in condensed-phase molecular systems. This apโ€ฆ

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Chemistry Preprint PDF DOI

Scalable Reactive Atomistic Dynamics with GAIA

Suhwan Song, Heejae Kim, Jaehee Jang, Hyuntae Cho, Gunhee Kim, Geonu Kim ยท 2025

Groundbreaking advances in materials and chemical research have been driven by the development of atomistic simulations. However, the broader applicability of atomistic simulations remains limited, asโ€ฆ

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Chemistry Preprint PDF DOI

Development of an Optimized Parameter Set for Monovalent Ions in the Reference Interaction Site Model of Solvation

Felipe Silva Carvalho, Alexander McMahon, David A. Case, Tyler Luchko ยท 2025

Accurate modeling of aqueous monovalent ions is essential for understanding the function of biomolecules, such as nucleic acid stability and binding of charged drugs to protein targets. The 1D and 3D โ€ฆ

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Chemistry Preprint PDF DOI

Noise-reduced stochastic resolution of identity to CC2 for large-scale calculations via tensor hypercontraction

Chongxiao Zhao, Wenjie Dou ยท 2025

The stochastic resolution of identity (sRI) approximation significantly reduces the computational scaling of CC2 from O(N^5) to O(N^3), where N is a measure of system size. However, the inherent stochโ€ฆ

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Chemistry Preprint PDF DOI

MLIP Arena: Advancing Fairness and Transparency in Machine Learning Interatomic Potentials via an Open, Accessible Benchmark Platform

Yuan Chiang, Tobias Kreiman, Christine Zhang, Matthew C. Kuner, Elizabeth Weaver, Ishan Amin, Hyunsoo Park, Yunsung Lim, Jihan Kim, Daryl Chrzan, Aron Walsh, Samuel M. Blau, Mark Asta, Aditi S. Krishnapriyan ยท 2025

Machine learning interatomic potentials (MLIPs) have revolutionized molecular and materials modeling, but existing benchmarks suffer from data leakage, limited transferability, and an over-reliance onโ€ฆ

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Chemistry Preprint PDF DOI

Numerically exact quantum dynamics with tensor networks: Predicting the decoherence of interacting spin systems

Tianchu Li, Pranay Venkatesh, Nanako Shitara, Andres Montoya-Castillo ยท 2025

Predicting the quantum dynamics of promising solid-state and molecular quantum technology candidates remains a formidable challenge. Yet, accessing these dynamics is key to understanding and controlliโ€ฆ

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Chemistry Preprint PDF DOI

Bayesian Neural Networks versus deep ensembles for uncertainty quantification in machine learning interatomic potentials

Riccardo Farris, Emanuele Telari, Nongnuch Artrith, Konstantin Neyman, Albert Bruix ยท 2025

Neural-network-based machine learning interatomic potentials have emerged as powerful tools for predicting atomic energies and forces, enabling accurate and efficient simulations in atomistic modelingโ€ฆ

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Chemistry Preprint PDF DOI

Resolving the Body-Order Paradox of Machine Learning Interatomic Potentials

Sanggyu Chong, Tong Jiang, Michelangelo Domina, Filippo Bigi, Federico Grasselli, Joonho Lee, Michele Ceriotti ยท 2025

In many cases, the predictions of machine learning interatomic potentials (MLIPs) can be interpreted as a sum of body-ordered contributions, which is explicit when the model is directly built on neighโ€ฆ

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Chemistry Preprint PDF DOI

Extension of the Jordan-Wigner mapping to nonorthogonal spin orbitals for quantum computing application to valence bond approaches

Alessia Marruzzo, Mose Casalegno, Piero Macchi, Fabio Mascherpa, Bernardino Tirri, Guido Raos, Alessandro Genoni ยท 2025

Quantum computing offers a promising platform to address the computational challenges inherent in quantum chemistry, and particularly in valence bond (VB) methods, which are chemically appealing but sโ€ฆ

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