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๐Ÿ” biological ๐Ÿ“‚ Computer Science
Showing 2854 results for "biological" in Computer Science
Computer Science Preprint PDF DOI

Synthetic Biological Intelligence: System-Level Abstractions and Adaptive Bio-Digital Interaction

Martin Schottlender, Pengjie Zhou, Veronika Volkova, Fatima Rani, Ruifeng Zheng, Juan A. Cabrera, Frank H.P. Fitzek, Pit Hofmann ยท 2026

Concurrent advances across fields such as organoid technology, Microelectrode Arrays (MEAs), neuromorphic computing, and machine learning have given rise to a groundbreaking research paradigm: Synthetโ€ฆ

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BAss: Symbolic Reasoning in Abstract Dialectical Frameworks

Samuel Pastva, Van-Giang Trinh ยท 2026

We present BAss (BDD-based ADF symbolic solver), a novel analysis tool for Abstract Dialectical Frameworks (ADFs) based on Binary Decision Diagrams (BDDs). It supports the fully symbolic computation oโ€ฆ

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Economical and ecological impact of sector coupling applied to computing clusters

P. Bechtle, O. Freyermuth, M. Geffers, M. Giffels, M. Hubner, F. Kirfel, J. Kreutz, S. Krieg, S. Matberg, M. Schnepf ยท 2026

The rising share of abundant renewable energy inevitably increases volatility in the electricity production. The concept of sector coupling means that the volatility of electricity production to a larโ€ฆ

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Mining Negative Sequential Patterns to Improve Viral Genomic Feature Representation and Classification

Wenxi Zhu, Wensheng Gan, Zhenlian Qi ยท 2026

Viruses represent the most abundant biological entities on Earth and play a pivotal role in microbial ecosystems, yet, as prominent human pathogens, they are closely linked to human morbidity and mortโ€ฆ

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How Do Software Engineering Students Use Generative AI in Real-World Capstone Projects? An Empirical Baseline Study

Michael Mircea, Elisa Schmid, Jakob Droste, Kurt Schneider ยท 2026

Real-world Capstone Projects (RWCPs) are a key component of software engineering education, enabling students to develop software for external clients under authentic conditions. Their high ecologicalโ€ฆ

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From Players to Participants: Citizen Science and Video Games to Understand Cognition

Syrine Salouhou, Edgar Dubourg, Maxwell Scott-Slade, Hugo Spiers, Antoine Coutrot ยท 2026

Citizen science is transforming how cognitive scientists study the human mind, and video games are at the heart of this shift. By embedding experimental tasks into engaging, game-like experiences, resโ€ฆ

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Enhanced CAD-Based Quantifier Elimination With Multiple Equational Constraints

James H. Davenport, Matthew England, Scott McCallum ยท 2026

This paper presents two enhancements to cylindrical algebraic decomposition (CAD) based quantifier elimination (QE) for cases in which multiple equational constraints are present in the given input foโ€ฆ

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Quantifying the Persistence of Daily Routines

Nguyen Luong, Talayeh Aledavood ยท 2026

Daily life is structured by recurring routines that coordinate biological rhythms with social and occupational demands. Individual differences in work schedules, family obligations, and social commitmโ€ฆ

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Mycoponically Integrated Network Device for Multimodal Sensing with Living Mycelial Networks

Zihan Oliver Zeng, David Marshall Porterfield, Upinder Kaur ยท 2026

Multimodal environmental monitoring conventionally requires a suite of purpose-built transducers, each constrained to a predefined target. Here, we present MIND (Mycoponically Integrated Network Devicโ€ฆ

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A Co-Evolutionary Theory of Human-AI Coexistence: Mutualism, Governance, and Dynamics in Complex Societies

Somyajit Chakraborty ยท 2026

Classical robot ethics is often framed around obedience, including Asimov's laws. This framing is insufficient for contemporary AI systems, which are increasingly adaptive, generative, embodied, and eโ€ฆ

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Biomedical systems biology workflow orchestration and execution with PoSyMed

Simon Suwer, Zoe Chervontseva, Kester Bagemihl, Jan Baumbach, Olga Tsoy, Andreas Maier ยท 2026

The rapid growth of scientific software has created practical barriers for bioinformatics research. Although powerful statistical, artificial intelligence (AI)-based methods are now widely available, โ€ฆ

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Relational AI in Education: Reciprocity, Participatory Design, and Indigenous Worldviews

Roberto Martinez-Maldonado, Vanessa Echeverria, Jenna Hawes, YJ Kim, Zara Maddigan, Mikaela Milesi, Todd Nelson, Yi-Shan Tsai ยท 2026

Education is not merely the transmission of information or the optimisation of individual performance; it is a fundamentally social, constructive, and relational practice. However, recent advances in โ€ฆ

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Coexisting Tempo Traditions in Beethoven's Piano and Cello Sonatas: A K-means Clustering Analysis of Recorded Performances, 1930-2012

Ignasi Sole ยท 2026

Empirical studies of recorded performance have conventionally modelled tempo change as a unidirectional historical process, fitting linear regression lines to tempo data plotted against recording yearโ€ฆ

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When does a control system compute? Digital, mechanical and open-loop systems

Dominic Horsman, Susan Stepney, Tim Clarke, Viv Kendon ยท 2026

Control systems are ubiquitous in modern technology, comprising an engineered plant to be kept within specific, often fine-tuned, limits, and a separate controller that ensures this is the case. Whileโ€ฆ

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What Makes a Bacterial Model a Good Reservoir Computer? Predicting Performance from Separability and Similarity

Laura Alonso Bartolome (MICALIS, Mnemosyne), Jean-Loup Faulon (MICALIS), Xavier Hinaut (Mnemosyne) ยท 2026

Biological systems are promising substrates for computation because they naturally process environmental information through complex internal dynamics. In this study, we investigate whether bacterial โ€ฆ

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Use and usability: concepts of representation in philosophy, neuroscience, cognitive science, and computer science

Ben Baker, Richard D. Lange, Andrew Richmond, Nikolaus Kriegeskorte, Rosa Cao, Xaq Pitkow, Odelia Schwartz ยท 2026

Representations play a central role in the study of both biological and artificial intelligence, as well as philosophy of mind. Across neuroscience, computer science, and philosophy, a recurring themeโ€ฆ

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Model Capability Assessment and Safeguards for Biological Weaponization

Michael Richter ยท 2026

AI leaders and safety reports increasingly warn that advances in model reasoning may enable biological misuse, including by low-expertise users, while major labs describe safeguards as expanding but sโ€ฆ

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RCSB PDB AI Help Desk: retrieval-augmented generation for protein structure deposition support

Vivek Reddy Chithari, Jasmine Y. Young, Irina Persikova, Yuhe Liang, Gregg V. Crichlow, Justin W. Flatt, Sutapa Ghosh, Brian P. Hudson, Ezra Peisach, Monica Sekharan, Chenghua Shao, Stephen K. Burley ยท 2026

Motivation: Structural Biologists have contributed more than 245,000 experimentally determined three-dimensional structures of biological macromolecules to the Protein Data Bank (PDB). Incoming data aโ€ฆ

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Participation and Power: A Case Study of Using Ecological Momentary Assessment to Engage Adolescents in Academic Research

Ozioma C. Oguine, Elmira Rashidi, Pamela J. Wisniewski, Karla Badillo-Urquiola ยท 2026

Ecological Momentary Assessment (EMA) is widely used to study adolescents' experiences; yet, how the design of EMA platforms shapes engagement, research practices, and power dynamics in youth studies โ€ฆ

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A Simulation-Based Method for Testing Collaborative Learning Scaffolds Using LLM-Based Multi-Agent Systems

Han Wua, Lishan Zhang, Chunming Lu ยท 2026

Background: Traditional research on collaborative learning scaffolding is often time-consuming and resource-heavy, which hinders the rapid iteration and optimization of instructional strategies. LLM-bโ€ฆ

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