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🔍 computing methodologies 📂 Neuroscience
Showing 505 results for "computing methodologies" in Neuroscience
Neuroscience Preprint PDF DOI

Foundation models for discovering robust biomarkers of neurological disorders from dynamic functional connectivity

Deepank Girish, Yi Hao Chan, Sukrit Gupta, Jing Xia, Jagath C. Rajapakse · 2026

Several brain foundation models (FM) have recently been proposed to predict brain disorders by modelling dynamic functional connectivity (FC). While they demonstrate remarkable model performance and z…

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Neuroscience Preprint PDF DOI

Quantum-Like Models of Cognition and Decision Making: Open-Systems and Gorini--Kossakowski--Sudarshan--Lindblad Dynamics

Masanari Asano, Andrei Khrennikov · 2026

This paper starts with surveying the evolution of quantum-like models of cognition and decision making, transitioning from static kinematic representations to a robust dynamical framework based on ope…

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Neuroscience Preprint PDF DOI

From Patterns to Policy: A Scoping Review Based on Bibliometric Analysis (ScoRBA) of Intelligent and Secure Smart Hospital Ecosystems

Adi Wijaya, Budi Hermawan, Wiga Maulana Baihaqi, Catur Supriyanto · 2026

This study examines the evolution of Intelligent and Secure Smart Hospital Ecosystems using a Scoping Review with Bibliometric Analysis (ScoRBA) to map research patterns, identify gaps, and derive pol…

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Neuroscience Preprint PDF DOI

Structural and dynamical strategies to prevent runaway excitation in reservoir computing

Claus Metzner, Achim Schilling, Andreas Maier, Thomas Kinfe, Patrick Krauss · 2026

Reservoirs, typically implemented as recurrent neural networks with fixed random connection weights, can be combined with a simple trained readout layer to perform a wide range of computational tasks.…

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Neuroscience Preprint PDF DOI

The Geometry of Forgetting

Sambartha Ray Barman, Andrey Starenky, Sophia Bodnar, Nikhil Narasimhan, Ashwin Gopinath · 2026

Why do we forget? Why do we remember things that never happened? The conventional answer points to biological hardware. We propose a different one: geometry. Here we show that high-dimensional embeddi…

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Neuroscience Preprint PDF DOI

Compiling molecular ultrastructure into neural dynamics

Konrad P. Kording, Anton Arkhipov, Davy Deng, Sean Escola, Seth G.N. Grant, Gal Haspel, Micha{l} Januszewski, Narayanan Kasthuri, Nina Khera, Richie E. Kohman, Grace Lindsay, Jeantine Lunshof, Adam Marblestone, David A. Markowitz, Jordan Matelsky, Brett Mensh, Patrick Mineault, Andrew Payne, Joanne Peng, Xaq Pitkow, Philip Shiu, Gregor Schuhknecht, Sven Truckenbrodt, Joshua T. Vogelstein, Edward S. Boyden · 2026

High-resolution brain imaging can now capture not just synapse locations but their molecular composition, with the cost of such mapping falling exponentially. Yet such ultrastructural data has so far …

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Neuroscience Preprint PDF DOI

The Neuroscience of Transformers

Peter Koenig, Mario Negrello · 2026

Neuroscience has long informed the development of artificial neural networks, but the success of modern architectures invites, in turn, the converse: can modern networks teach us lessons about brain f…

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Neuroscience Preprint PDF DOI

Fusion Learning from Dynamic Functional Connectivity: Combining the Amplitude and Phase of fMRI Signals to Identify Brain Disorders

Jinlong Hu, Jiatong Huang, Zijian Cai · 2026

Dynamic functional connectivity (dFC) derived from resting-state functional magnetic resonance imaging (fMRI) has been extensively utilized in brain science research. The sliding window correlation (S…

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Neuroscience Preprint PDF DOI

Developing the PsyCogMetrics AI Lab to Evaluate Large Language Models and Advance Cognitive Science -- A Three-Cycle Action Design Science Study

Zhiye Jin, Yibai Li, K. D. Joshi, Xuefei (Nancy) Deng, Xiaobing (Emily) Li · 2026

This study presents the development of the PsyCogMetrics AI Lab (psycogmetrics.ai), an integrated, cloud-based platform that operationalizes psychometric and cognitive-science methodologies for Large …

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Neuroscience Preprint PDF DOI

An Information-Theoretic Framework For Optimizing Experimental Design To Distinguish Probabilistic Neural Codes

Po-Chen Kuo, Edgar Y. Walker · 2026

The Bayesian brain hypothesis has been a leading theory in understanding perceptual decision-making under uncertainty. While extensive psychophysical evidence supports the notion of the brain performi…

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Neuroscience Preprint PDF DOI

A Benchmark Analysis of Graph and Non-Graph Methods for Caenorhabditis Elegans Neuron Classification

Jingqi Lu, Keqi Han, Yun Wang, Lu Mi, Carl Yang · 2026

This study establishes a benchmark for Caenorhabditis elegans neuron classification, comparing four graph methods (GCN, GraphSAGE, GAT, GraphTransformer) against four non-graph methods (Logistic Regre…

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Neuroscience Preprint PDF DOI

CL API: Real-Time Closed-Loop Interactions with Biological Neural Networks

David Hogan, Andrew Doherty, Boon Kien Khoo, Johnson Zhou, Richard Salib, James Stewart, Kiaran Lawson, Alon Loeffler, Brett Kagan · 2026

Biological neural networks (BNNs) are increasingly explored for their rich dynamics, parallelism, and adaptive behavior. Beyond understanding their function as a scientific endeavour, a key focus has …

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Neuroscience Preprint PDF DOI

ENIGMA: EEG-to-Image in 15 Minutes Using Less Than 1% of the Parameters

Reese Kneeland, Wangshu Jiang, Ugo Bruzadin Nunes, Paul Steven Scotti, Arnaud Delorme, Jonathan Xu · 2026

To be practical for real-life applications, models for brain-computer interfaces must be easily and quickly deployable on new subjects, effective on affordable scanning hardware, and small enough to r…

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Neuroscience Preprint PDF DOI

Polyphonic Intelligence: Constraint-Based Emergence, Pluralistic Inference, and Non-Dominating Integration

Alexander D Shaw · 2026

Across neuroscience, artificial intelligence, and related fields, dominant models of intelligence typically privilege convergence: uncertainty is reduced, competing explanations are eliminated, and be…

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Neuroscience Preprint PDF DOI

Cognition spaces: natural, artificial, and hybrid

Ricard Sole, Luis F Seoane, Jordi Pla-Mauri, Michael Timothy Bennett, Michael E. Hochberg, Michael Levin · 2026

Cognitive processes are realized across an extraordinary range of natural, artificial, and hybrid systems, yet there is no unified framework for comparing their forms, limits, and unrealized possibili…

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Neuroscience Preprint PDF DOI

Testing three models of cognitive stress effects: A psychopharmacological randomized controlled trial of acute stress and stress hormones across visual perception, response inhibition and cognitive flexibility

Lisa Weckesser, Charlotte Grosskopf, Benjamin Weber, Selen Soylu, Tanja Endrass, Robert Miller · 2026

Acute stress alters cognitive performance, yet competing models make divergent predictions regarding the mechanisms, scope, and temporal dynamics of these effects. This large-scale randomized controll…

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Neuroscience Preprint PDF DOI

Data-driven inference of brain dynamical states from the r-spectrum of correlation matrices

Christopher Gabaldon, Adria Mulero, Rong Wang, Daniel A. Martin, Sabrina Camargo, Qian-Yuan Tang, Ignacio Cifre, Changsong Zhou, Dante R. Chialvo · 2026

We present a data-driven framework to characterize large-scale brain dynamical states directly from correlation matrices at the single-subject level. By treating correlation thresholding as a percolat…

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Neuroscience Preprint PDF DOI

Rogue Variable Theory: A Quantum-Compatible Cognition Framework with a Rosetta Stone Alignment Algorithm

Jacek Ma{l}ecki, Alexander Mathiesen-Ohman · 2026

Many of the most consequential dynamics in human cognition occur \emph{before} events become explicit: before decisions are finalized, emotions are labeled, or meanings stabilize into narrative form. …

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Neuroscience Preprint PDF DOI

SymSeqBench: a unified framework for the generation and analysis of rule-based symbolic sequences and datasets

Barna Zajzon, Younes Bouhadjar, Maxime Fabre, Felix Schmidt, Noah Ostendorf, Emre Neftci, Abigail Morrison, Renato Duarte · 2025

Sequential structure is a key feature of multiple domains of natural cognition and behavior, such as language, movement and decision-making. Likewise, it is also a central property of tasks to which w…

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Neuroscience Preprint PDF DOI

Dynamical incompatibilities in paced finger tapping experiments

Ariel D. Silva, Claudia R. Gonzalez, Rodrigo Laje · 2025

The behavioral description of the sensorimotor synchronization phenomenon in humans is exhaustive, mostly by using variations of the traditional paced finger-tapping task. This task helps unveil the i…

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