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๐Ÿ” models ๐Ÿ“‚ Chemistry
Showing 5447 results for "models" in Chemistry
Chemistry Preprint PDF DOI

Towards Accelerated SCF Workflows with Equivariant Density-Matrix Learning and Analytic Refinement

Zuriel Y. Yescas-Ramos, Andres Alvarez-Garcia, Huziel E. Sauceda ยท 2026

We present \textsc{dm-PhiSNet}, a physically constrained \textsc{PhiSNet}-based equivariant model that predicts one-electron reduced density matrices (1-RDMs) directly from molecular geometries in an โ€ฆ

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Chemistry Preprint PDF DOI

Stepping up enhanced rate calculations with EATR-flooding

Nicodemo Mazzaferro, Willmor J Pena Ccoa, Pilar Cossio, Glen M. Hocky ยท 2026

Several recent methods have shown that it is possible to compute rate constants of very slow biomolecular processes using simulations where a time-dependent bias is added along one or several collectiโ€ฆ

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Chemistry Preprint PDF DOI

Experimentally Accurate Graph Neural Network Predictions of Core-Electron Binding Energies

Adam E. A. Fouda, Joshua Zhou, Rodrigo Ferreira, Patrick Phillips, Valay Agarawal, Bhavnesh Jangid, Jacob J. Wardzala, Rui Ding, Junhong Chen, Nicole Tebaldi, Phay J. Ho, Laura Gagliardi, Linda Young ยท 2026

Graph neural network architectures are advantageous for predicting core-electron binding energies which depend on local bond environment effects, as the number of message passing layers defines the toโ€ฆ

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Chemistry Preprint PDF DOI

Effect of reaction temperature on nascent carbonaceous particles from toluene shock-tube pyrolysis: Insights from FTIR and Raman spectroscopy

Meysam K. Rezaeian, Can Shao, Jurgen Herzler, Mustapha Fikri, Greg J. Smallwood, Christof Schulz ยท 2026

The transition from gaseous precursors to nascent solid particles and their subsequent structural maturation were investigated in single-pulse shock-tube experiments using ex situ Fourier-transform inโ€ฆ

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Chemistry Preprint PDF DOI

Physics-based modeling of cyclic and calendar aging of LIBs with Si-Gr composite anodes

Micha C. J. Philipp, Lukas Kobbing, Alexander Karger, Andreas Jossen, Arnulf Latz, Birger Horstmann ยท 2026

Higher energy density and longer lifetime are the requirements for next-generation lithium-ion batteries. A promising anode material is silicon, which offers high specific capacity, but its significanโ€ฆ

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Chemistry Preprint PDF DOI

Solv-eze: Automated Placement of Explicit Water Molecules Using 3D-RISM

Felipe Silva Carvalho, Steven Ramsey, Tom Kurtzman, Tyler Luchko ยท 2026

Molecular dynamics (MD) simulations are widely used to study biological systems, where water molecules often play a critical role in protein-ligand interactions. In conventional MD preparation protocoโ€ฆ

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Chemistry Preprint PDF DOI

AI-Powered Surrogate Modelling for Multiscale Combustion: A Critical Review and Opportunities

Amirali Shateri, Zhiyin Yang, Yuying Yan, Manosh C. Paul, Jianfei Xie ยท 2026

Recent advances in combustion science have led to the generation of large volumes of data from high-fidelity simulations, detailed chemical-kinetic calculations and engine-relevant measurements and crโ€ฆ

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Chemistry Preprint PDF DOI

Accelerated Surface Hopping via Scaling the Spin--Orbit Coupling: Opportunities for Machine Learning

Jakub Martinka, Mahesh Kumar Sit, Pavlo O. Dral, Jiri Pittner ยท 2026

Surface hopping (SH) methods are typically employed to simulate ultrafast nonadiabatic processes, but long timescales often remain beyond their reach. To address this, accelerated SH scheme mitigate tโ€ฆ

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Chemistry Preprint PDF DOI

Excitation of Low-Frequency Modes and the Effects of Protein Dynamics on Spectral Densities of Bacteriochlorophyll Molecules

Sayan Maity, Tristan A. Mauck, Ulrich Kleinekathofer ยท 2026

In the theory of open quantum systems, spectral densities are key quantities for modeling the dynamics and spectroscopic properties of the system under investigation. In the case of light-harvesting cโ€ฆ

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Chemistry Preprint PDF DOI

Thermal conductivity of aligned polymers with kinks

Igor V. Parshin, Igor V. Rubtsov, Alexander L. Burin ยท 2026

Thermal conductivity of aligned polymer molecules can be exceptionally high along the alignment direction due to energy transport through strong covalent bonds. At the same time, it is highly sensitivโ€ฆ

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Chemistry Preprint PDF DOI

Computational Design and Experimental Validation of Photoactive PARP1 Inhibitors

Simon Axelrod, Miroslav Kaspar, Kristyna Jelinkova, Marketa Smidkova, Erika Bartunkova, Sille Stepanova, Eugene Shakhnovich, Vaclav Kasicka, Martin Dracinsky, Zlatko Janeba, Rafael Gomez-Bombarelli ยท 2026

Light-activated drugs are a promising way to treat localized diseases for which existing treatments have severe side effects. However, their development is complicated by the set of photophysical and โ€ฆ

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Chemistry Preprint PDF DOI

Errors that matter: Uncertainty-aware universal machine-learning potentials calibrated on experiments

Matthias Kellner, Teitur Hansen, Thomas Bligaard, Karsten Wedel Jacobsen, Michele Ceriotti ยท 2026

Machine-learning models of atomic-scale interactions achieve the accuracy of the quantum mechanical calculations on which they are trained, but at a dramatically lower computational cost. Their predicโ€ฆ

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Chemistry Preprint PDF DOI

Vib2Conf: AI-driven discrimination of molecular conformations from vibrational spectra

Xin-Yu Lu, De-Yi Lin, Tong Zhu, Bin Ren, Hao Ma, Guo-Kun Liu ยท 2026

Retrieving or generating two-dimensional molecular structures on the basis of vibrational spectra has been well demonstrated via deep learning models. However, deciphering three-dimensional molecular โ€ฆ

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Chemistry Preprint PDF DOI

Broadband impulsive stimulated Raman spectroscopy reveals electronic state-specific vibronic coupling and vibrational coherence transfer through nonadiabatic electronic coupling

Ramandeep Kaur, Shaina Dhamija, Garima Bhutani, Amit Kumar, Arijit K. De ยท 2026

Vibrational wavepacket dynamics in the ground (X) and excited (B) electronic states of iodine under impulsive-pump/broadband-probe excitation are revisited. A method for accurate chirp correction, necโ€ฆ

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Chemistry Preprint PDF DOI

Charge order, domain order, ideal mixing and absence of demixing in 2D binary mixtures of alcohols

Lydia Chelli, Aurelien Perera ยท 2026

Binary mixtures of two dimensional, site-based models of alcohols are investigated by computer simulations, with a focus on ideal mixing, local clustering and miscibility trends. Four representative sโ€ฆ

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Chemistry Preprint PDF DOI

DeepHartree: A Poisson-Coupled Neural Field for Scalable Density Functional Theory

Jiankun Wu, Jinming Fan, Chao Qian, Shaodong Zhou ยท 2026

Ab initio calculations are fundamentally bottlenecked for large systems by the steep computational scaling of solving self-consistent field (SCF) equations. While machine learning offers potential accโ€ฆ

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Chemistry Preprint PDF DOI

Dynamically Corrected Bethe-Salpeter Equation Solver for Self-consistent $GW$ Reference on the Matsubara Frequency Axis

Ming Wen, Gaurav Harsha, Dominika Zgid ยท 2026

We present a Bethe-Salpeter equation (BSE) solver based on a self-consistent $GW$ reference evaluated on the Matsubara frequency axis, referred to as BSE@sc$GW$. The self-consistent $GW$ starting poinโ€ฆ

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Chemistry Preprint PDF DOI

Optical Lineshape Models and the Generalized Einstein Relation between Absorption and Stimulated Emission

Aman K. Agrawal, Jisu Ryu, David M. Jonas ยท 2026

Recently, Ryu et al. generalized Einstein's three coefficients for absorption, stimulated emission, and spontaneous emission between two quantum levels to a set of four spectra between two broadened bโ€ฆ

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Chemistry Preprint PDF DOI

Plasmon-Exciton Coupling and Dephasing in Hybrid Au Nanostructure/J-Aggregate Systems

Janak Bhandari, Robert Catuto, Zhumin Zhang, Bradley D. Smith, Hsing-Ta Chen, Gregory V. Hartland ยท 2026

The coupling between propagating surface plasmon polaritons (SPPs) in Au nanostructures and the exciton transitions of cyanine dye J-aggregates has been examined using leakage radiation microscopy. Reโ€ฆ

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Chemistry Preprint PDF DOI

Molecular dynamics simulations of Nafion thin films at a platinum catalyst surface: Correlating structure with charging behaviour

Dustin Vivod, Binny A. Davis, Tobias Binninger, Michael Eikerling ยท 2026

Electrocatalysis is greatly influenced by the local reaction environment, which is governed by the structure of the catalyst, the distribution of the electrolyte, and the local electric field. In cataโ€ฆ

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