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Showing 529 results for "protein" in Engineering · Preprint
Engineering Preprint PDF DOI

Predicting food taste with bound-driven optimization

Pagkratis Tagkopoulos, Dimitris Sfondilis, Ilias Tagkopoulos, Tarek Zohdi · 2026

The prediction of sensory attributes from ingredient-level formulations is an emerging challenge at the intersection of food science and artificial intelligence. We address the fundamental question of…

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Engineering Preprint PDF DOI

When structure does not imply symmetry

Skyler R. St. Pierre, Thibault Vervenne, Ethan C. Darwin, Ellen Kuhl · 2026

Fungal protein materials exhibit inherently anisotropic microstructures formed by networks of hyphae, which suggest a natural pathway to replicate the fibrous texture of animal meat. We probe whether …

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Engineering Preprint PDF DOI

Co-Design of Cryptographic Parameters and Delay-Aware Feedback Gain for Encrypted Control Systems

Yeongjun Jang · 2026

Encrypted control employs homomorphic encryption (HE) to protect both the computation and communication stages, making it a promising approach for secure networked control systems. Most existing resul…

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Engineering Preprint PDF DOI

Air supply control for proton exchange membrane fuel cells without explicit modeling

Meziane Ait Ziane, Michel Zasadzinski, Cedric Join, Michel Fliess · 2026

Our objective is to study the performance and robustness of the model-free strategy for controlling the oxygen stoichiometry of a fuel cell air supply system with a proton exchange membrane. After rev…

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Engineering Preprint PDF DOI

Algorithmic Power Optimisation in Constrained Railway Networks: A Systematic Review

Marton Laszlo Ambrus · 2026

The decarbonisation of heavy-duty railway networks requires maximising the capacity of existing electrical infrastructure. Integrating heavy freight alongside fast passenger services exposes the hard …

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Engineering Preprint PDF DOI

Go Big or Go Home: Simulating Mobbing Behavior with Braitenbergian Robots

Elaheh Sanoubari · 2026

We used the Webots robotics simulation platform to simulate a dyadic avoiding and mobbing predator behavior in a group of Braitenbergian robots. Mobbing is an antipredator adaptation used by some anim…

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Engineering Preprint PDF DOI

A computational framework to predict the spreading of Alzheimer's disease

A. Vazquez-Palomo, C. Betegon, J. Weickenmeier, E. Martinez-Paneda · 2026

Alzheimer's disease is characterised by the spreading of misfolded proteins and progressive structural changes in the brain. Despite significant clinical research, understanding how microscopic protei…

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Engineering Preprint PDF DOI

CORAL: COntextual Reasoning And Local Planning in A Hierarchical VLM Framework for Underwater Monitoring

Zhenqi Wu, Yuanjie Lu, Xuesu Xiao, Xiaomin Lin · 2026

Oyster reefs are critical ecosystem species that sustain biodiversity, filter water, and protect coastlines, yet they continue to decline globally. Restoring these ecosystems requires regular underwat…

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Engineering Preprint PDF DOI

Silent Speech Interfaces in the Era of Large Language Models: A Comprehensive Taxonomy and Systematic Review

Kele Xu, Yifan Wang, Ming Feng, Qisheng Xu, Wuyang Chen, Yutao Dou, Cheng Yang, Huaimin Wang · 2026

Human-computer interaction has traditionally relied on the acoustic channel, a dependency that introduces systemic vulnerabilities to environmental noise, privacy constraints, and physiological speech…

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Engineering Preprint PDF DOI

Design of a Robot-Assisted Chemical Dialysis System

Diane Jung, Caleb Escobedo, Noah Liska, Maitrey Gramopadhye, Daniel Szafir, Alessandro Roncone, Carson Bruns · 2026

Scientists perform diverse manual procedures that are tedious and laborious. Such procedures are considered a bottleneck for modern experimental science, as they consume time and increase burdens in f…

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Engineering Preprint PDF DOI

Tau-BNO: Brain Neural Operator for Tau Transport Model

Nuutti Barron, Heng Rao, Urmi Saha, Yu Gu, Zhenghao Liu, Ge Yu, Defu Yang, Ashish Raj, Minghan Chen · 2026

Mechanistic modeling provides a biophysically grounded framework for studying the spread of pathological tau protein in tauopathies like Alzheimer's disease. Existing approaches typically model tau pr…

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Engineering Preprint PDF DOI

STRIDE: Post-Training LLMs to Reason and Refine Bio-Sequences via Edit Trajectories

Daiheng Zhang, Shiyang Zhang, Sizhuang He, Yangtian Zhang, Syed Asad Rizvi, David van Dijk · 2026

Discrete biological sequence optimization requires iterative refinement under strict syntactic constraints. Diffusion models offer progressive refinement but do not naturally expose controllable discr…

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Engineering Preprint PDF DOI

Molecular Dynamics Simulations Reveal PolyQ-Length-Dependent Conformational Changes in Huntingtin Exon-1: Implications for Environmental Co-Solvent Modulation of Aggregation-Prone States

Jai Geddes-Nelson, Xiaochen Liu, Ken-Tye Yong · 2026

Huntington's disease (HD) is caused by CAG-repeat expansion in HTT, which lengthens the polyglutamine (polyQ) tract in huntingtin (HTT) and promotes misfolding and aggregation. While polyQ-length-depe…

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Engineering Preprint PDF DOI

Guaranteed Image Classification via Goal-oriented Joint Semantic Source and Channel Coding

Wenchao Wu, Min Qiu, Yansha Deng, Jinhong Yuan · 2026

To enable critical applications such as remote diagnostics, image classification must be guaranteed under bandwidth constraints and unreliable wireless channels through joint source and channel coding…

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Engineering Preprint PDF DOI

An automatic counting algorithm for the quantification and uncertainty analysis of the number of microglial cells trainable in small and heterogeneous datasets

L. Martino, M. M. Garcia, P. S. Paradas, E. Curbelo · 2026

Counting immunopositive cells on biological tissues generally requires either manual annotation or (when available) automatic rough systems, for scanning signal surface and intensity in whole slide im…

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Engineering Preprint PDF DOI

Navigating heterogeneous protein landscapes through geometry-aware smoothing

Srinivas Anumasa, Barath Chandran, Tingting Chen, Nuwaisir Mohammad Rahman, Yingtao Zhu, Rushi Shah, Hongyu He, Peisong Zhang, Yizhen Liao, Yiming Tang, Yong Shen, Tianfan Fu, Rui Qing, Xiao Li, Sebastian Maurer-Stroh, Xinyi Su, Zhizhuo Zhang, Dianbo Liu · 2026

The evolutionary fitness landscape of biological molecules is extremely sparse and heterogeneous, with functional sequences forming isolated dense ``islands'' within a vast combinatorial space of larg…

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Engineering Preprint PDF DOI

i-Socket: Design, Development, and Pilot Evaluation of an Individualized Multi-Material, Multi-Thickness Transtibial Prosthetic Socket

Noor Alhuda Ameen, Omid Arfaie, Ramazan Unal · 2026

The prosthetic socket is an essential part in ensuring comfort and stability for the overall prosthesis system. This study proposes a multi-material/thickness individualized transtibial prosthetic soc…

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Engineering Preprint PDF DOI

Absorption mode broadband 2D MS for proteomics and metabolomics

Maria A van Agthoven (UNIROUEN, iC2MC, MBU / CAS), Marek Polak (MBU / CAS), Jan Fiala (MBU / CAS), Claude Nelcy Ounounou (UNIROUEN), Petr Halada (MBU / CAS), Michael Palasser, Anne Briot-Dietsch (IGBMC), Alan Kadek (MBU / CAS), Kathrin Breuker, Petr Novak (MBU / CAS), Carlos Afonso (COBRA, Institut CARMeN, iC2MC), Marc-Andre Delsuc (IGBMC) · 2026

Two-dimensional mass spectrometry (2D MS) is a method for tandem mass spectrometry that enables the correlation between precursor and fragment ions without the need for ion isolation. On a Fourier tra…

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Engineering Preprint PDF DOI

Blockchain-Enabled Renewable Energy Certificate Trading: A Secure and Privacy-Preserving Approach

Wei-Jen Liu, Wei-Yu Chiu, Weiqi Hua · 2026

In the 21st century, transitioning to renewable energy sources is imperative, with fossil fuel reserves depleting rapidly and recognizing critical environmental issues such as climate change, air poll…

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Engineering Preprint PDF DOI

Recursive Binary Identification with Differential Privacy and Data Tampering Attacks

Jimin Wang, Jieming Ke, Jin Guo, Yanlong Zhao · 2026

In this paper, we consider the parameter estimation in a bandwidth-constrained sensor network communicating through an insecure medium. The sensor performs a local quantization, and transmits a 1-bit …

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