Research
Research
Research
Research
1,407+ open-access research outputs.
Biological systems are promising substrates for computation because they naturally process environmental information through complex internal dynamics. In this study, we investigate whether bacterial …
This beta technical report asks how reusable experience should be represented so that it can function as effective test-time control and as a substrate for iterative evolution. We study this question …
Contemporary microservice systems continue to grow in scale and complexity, leading to increasingly frequent and costly failures. While recent LLM-based auto-remediation approaches have emerged, they …
The polygenic risk scores (PRS) have emerged as an important methodology for quantifying genetic predisposition to complex traits and clinical disease. Significant progress has been made in applying P…
Today's internet concentrates identity, payments, communication, and content hosting under a small number of corporate intermediaries, creating single points of failure, enabling censorship, and extra…
Cancer typically arises not from a single genetic mutation (i.e., hit) but from multi-hit combinations that accumulate within cells. However, enumerating multi-hit combinations becomes exponentially m…
We report the identification and proof of a universal constant, ln(3) = 1.09861, which governs the onset of bidirectional collective behavior in one-dimensional Poisson proximity networks. The constan…
Biomedical knowledge is fragmented across siloed databases -- Reactome for pathways, STRING for protein interactions, ClinicalTrials.gov for study registries, DrugBank for drug vocabularies, DGIdb for…
While deep learning has advanced speech enhancement (SE), effective phase modeling remains challenging, as conventional networks typically operate within a flat Euclidean feature space, which is not e…
The past decade has seen a dramatic increase in demand for GPUs to train Machine Learning (ML) models. Because it is prohibitively expensive for most organizations to build and maintain a large GPU cl…
For Indigenous Peoples of the Apya Yala (or Abya Yala), particularly in the Kara and Kichwa citizens of the Pan-Andean-Amazonian biocultural region, data is not merely a knowledge or information resou…
Genome rearrangement distances are an established method in genome comparison. Works in this area may include various rearrangement operations representing large-scale mutations, gene orientation info…
Since the first conference in Marseille in 1982, the International Conference on Logic Programming (ICLP) has been the premier international event for presenting research in logic programming. These p…
Phylogenetic networks allow modeling reticulate evolution, capturing events such as hybridization and horizontal gene transfer. A fundamental computational problem in this context is the Tree Containm…
Fair resource division algorithms, like those implemented in Spliddit platform, have traditionally been considered difficult for the end users to manipulate due to its complexities. This paper demonst…
Ethnic clothing is a vital carrier of cultural identity, yet its digital preservation often results in static displays that fail to convey deep cultural meaning or foster user engagement. Existing pra…
Card games are widely used to study sequential decision-making under uncertainty, with real-world analogues in negotiation, finance, and cybersecurity. These games typically fall into three categories…
In June 2024 I co-organized the FUture of Software Engineering symposium in Okinawa, Japan. Me, Andrian Marcus, Takashi Kobayashi and Shinpei Hayashi were general chairs, Nicole Novielli, Kevin Moran,…
In this research, we investigate the feasibility of adopting the Bottleneck Bandwidth and Round-trip propagation time (BBR) protocol as the default congestion control mechanism for TCP. Our central qu…
The rapidly evolving Android malware ecosystem demands high-quality, real-time datasets as a foundation for effective detection and defense. With the widespread adoption of mobile devices across indus…
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